The last stage of the procedure. If you don’t have a sequence of images and an excel file with embolism areas then head over to capture then process for more information. Overview has more information about the project and background.

The end result of the analysis is an optical vulnerability curve which describes when air forms and spreads in the xylem in relation to the degree of drought stress experienced by the plant.

Analysis instructions can be found below:

Resources

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Image analysis instructions

http://github.com/OpenSourceOV/analysis-instructions

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Help improve these resources by contributing to the project.

Contributing
20170502_104326_007

Sample selection and preparation

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Eucalyptus regnans stem
Captured by Chris @ the Brodribb Lab. This is the sequence before processing. Large sequence (~9MB) - may need to wait for it to load to run smoothly.